BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E11SP1|AL426386
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig802 493 e-139
>3x_Contig802
Length = 2309
Score = 493 bits (240), Expect = e-139
Identities = 277/294 (94%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 6 tggtcatgttatttatttccattgagcttttcaacgatttatgccattcttcccaaagtt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 tggtcatgttatttatttccattgagcttttcaacgatttatgccattcttcccaaagtt 1565
Query: 66 tctcgcgatctgtacttctgcgtcttttagtgcctatatgtgcgttggagctcatgatgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 tctcgcgatctgtacttctgcgtcttttagtgcctatatgtgcgttggagctcatgatgt 1505
Query: 126 tgtttaacactctatcagttggtagcatagcatcatcagagctcagataagaaactctcc 185
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1504 tgtttaacactctatcagttggtagcatagcatcatcagagctcag-taagaaactctcc 1446
Query: 186 ccaggatcagagaagtggtcactatttttwmcgtaatcatctagttcttcatctcnnang 245
||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | |
Sbjct: 1445 ccaggatcagagaagtggtcactattttttccgttatcatctagttcttcatctcttatg 1386
Query: 246 ncccanannnaggcananaggccatcatctgaagamgctacgamttcatcttca 299
|||| | |||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 1385 tcccatattttggcatataggccatcatctgaagacgctacgacttcatcttca 1332
Score = 320 bits (156), Expect = 2e-87
Identities = 160/164 (97%)
Strand = Plus / Minus
Query: 637 actcatcctttaaagtttcatttaaagtggatatctatcgttttactcttgttaatgcma 696
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 995 actcatcctttaaagtttcatttaaagtggatatctatcgttttactcttgttaatgcca 936
Query: 697 aaagagatmttamaaaaatamaagagggaacagttgacatgaatccttcttatttaatag 756
|||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 935 aaagagatcttacaaaaatacaagagggaacagttgacatgaatccttcttatttaatag 876
Query: 757 gagccgatggttgagggttttgttgcttcttttgttttgcgaca 800
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gagccgatggttgagggttttgttgcttcttttgttttgcgaca 832
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3028
Number of Sequences: 1807
Number of extensions: 3028
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.1 bits)